In addition to bug fixes and improved streaming speeds, Juicebox 1.4 has many enhancements, including sharing of bookmarks, custom annotating of 2D features, and creating HiC files from your own data!
Watch this short video for a quick overview of Juicebox!
If you use Juicebox in your research, please cite:
Neva C. Durand*, James T. Robinson*, Muhammad S. Shamim, Ido Machol, Jill P. Mesirov, Eric S. Lander, and Erez Lieberman Aiden. "Juicebox provides a visualization system for Hi-C contact maps with unlimited zoom." Cell Systems (In Press).
Suhas S.P. Rao*, Miriam H. Huntley*, Neva C. Durand, Elena K. Stamenova, Ivan D. Bochkov, James T. Robinson, Adrian L. Sanborn, Ido Machol, Arina D. Omer, Eric S. Lander, Erez Lieberman Aiden. "A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping." Cell 159, 2014.
* contributed equally